Information for 10-CAAGGAGAGAGCCTCC (Motif 24)

A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
Reverse Opposite:
C A T G A C T G C T G A A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C C A G T A G C T A C T G
p-value:1e-8
log p-value:-1.917e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 25.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------CAAGGAGAGAGCCTCC
TTCAGCACCATGGACAGCGCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CAAGGAGAGAGCCTCC
TCAGCACCATGGACAGCTCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAAGGAGAGAGCCTCC
--AGGTGNCAGACAG-
 A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CAAGGAGAGAGCCTCC
--------CAGCC---
 A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGAGAGAGCCTCC
NNNACCGAGAGTNNN---
 A C G T A C G T A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAAGGAGAGAGCCTCC
--AGGTGHCAGACA--
 A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CAAGGAGAGAGCCTCC
-----AGCGCGCC---
 A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAGAGAGCCTCC
TTGACCGAGAATTCC---
 A C G T A C G T A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAAGGAGAGAGCCTCC
-GRTGMTRGAGCC---
 A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CAAGGAGAGAGCCTCC
------AAGACCCYYN
 A G T C C T G A G C T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A G C T A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C