Information for 18-GGGAAAAGCTCCT (Motif 20)

C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A T C G A G T C A C G T A C G T A C G T A C G T A G T C A G T C A G T C
p-value:1e-9
log p-value:-2.133e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.2 +/- 30.2bp
Average Position of motif in Background67.8 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGAAAAGCTCCT
TGGAAAA------
 C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGAAAAGCTCCT
TAGGGCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAAAGCTCCT
CSTGGGAAAD------
 A C G T A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAAAGCTCCT
TGGGGCAAAGGTCA-
 A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAAAGCTCCT
NATGGAAAAN-----
 A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGGAAAAGCTCCT
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGAAAAGCTCCT
-GGGAAATCCCCN
 C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAAAGCTCCT
AATGGAAAAT-----
 A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAAAGCTCCT
NNTGGAAANN-----
 A C G T A C G T C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGGAAAAGCTCCT
-GGAAATCCCC--
 C T A G A C T G A C T G G T C A C G T A C G T A C G T A T C A G A T G C A C G T A G T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T