Information for 7-TGTCTCCTGCCGCGGG (Motif 9)

A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C A C T G A G T C A C T G A C T G A G T C G T C A A C T G A T C G C G T A A C T G C G T A A T G C T C G A
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 21.4bp
Average Position of motif in Background31.0 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG-
--TCNCCTGCTGNGNNN
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTCTCCTGCCGCGGG
GGCCYCCTGCTGDGH-
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG-
--TNTCCTGCTGTGNNG
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T
A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG
--CCCCCTGCTGTG--
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG-
--NNTCCTGCTGTGNNN
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG--
-------NGCCTGAGGCN
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG--
-------TGCCTGAGGCN
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG----
-----ANTGCCTGAGGCAAN
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:TGTCTCCTGCCGCGGG----
-----NTNGCCTCAGGCNNN
 A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTCCTGCCGCGGG
NNGTCGCGTGNCAC---
 A C G T A C G T A T C G C G A T A G T C A C G T A T G C G T A C A C G T A C T G A G T C A G T C A C T G A G T C A C T G A T C G A C T G
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T