Information for 6-AAGAACAAGATSAGCC (Motif 3)

C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
Reverse Opposite:
A T C G A C T G A G T C A C G T T A C G G C T A A C G T A T G C C G A T A C G T A C T G A G C T A G C T A G T C C G A T G A C T
p-value:1e-13
log p-value:-3.007e+01
Information Content per bp:1.695
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.9 +/- 32.9bp
Average Position of motif in Background67.7 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAGAACAAGATSAGCC
AACAAACAACAAGAG-----
 A C G T A C G T A C G T A C G T C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGAACAAGATSAGCC
TCACGGAACAATAGGTG--
 A C G T A C G T A C G T C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGATSAGCC
CAAACAACAACACCT---
 A C G T A C G T C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGATSAGCC
TTAAGAACAATAAATT--
 A C G T A C G T C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGAACAAGATSAGCC
TTTAGAACAATAAAAT--
 A C G T A C G T C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGAACAAGATSAGCC
NTTNAGAACAATTA-----
 A C G T A C G T A C G T C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGAACAAGATSAGCC
AAGAACATWHTGTTC-
 C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGAACAAGATSAGCC
-AAGATAAGATAACA-
 C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AAGAACAAGATSAGCC
NAGAACAGNCTGTNCT
 C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAGAACAAGATSAGCC
---AACAAT-------
 C G T A C G T A T C A G C T G A C T G A G T A C T G C A C G T A A T C G G T C A C G A T A T G C C G T A C T A G T A G C T A G C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T