Information for 8-TCYGGTGCCA (Motif 9)

A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G C T A G A T G C C G T A A T G C A G T C C T G A A C T G C G T A
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.887
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif95.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets42.9 +/- 27.2bp
Average Position of motif in Background54.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCYGGTGCCA---
---GGTGCCAAGT
 A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCYGGTGCCA--
---CGTGCCAAG
 A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCYGGTGCCA
--AGGTGTCA
 A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCYGGTGCCA---
----ATGCCAACC
 A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCYGGTGCCA-----
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

FLI1/MA0475.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCYGGTGCCA
CACTTCCGGT----
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A
A G T C T C G A A G T C C G A T A C G T G T A C G A T C A C T G A C T G G A C T A C G T A C G T A C G T A C G T

ETS1/MA0098.3/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCYGGTGCCA
CACTTCCGGT----
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A
A G T C T C G A A G T C G C A T A C G T G T A C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCYGGTGCCA--
----TTGCCAAG
 A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

ETV1/MA0761.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCYGGTGCCA
NACTTCCGGT----
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A
G A C T T C G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G G A C T A C G T A C G T A C G T A C G T

ERG/MA0474.2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCYGGTGCCA
NACTTCCGGT----
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C T G A T C G A C G T A T C G A G T C A G T C C G T A
A T G C T C G A A G T C C G A T C A G T T G A C A G T C A C T G A C T G G C A T A C G T A C G T A C G T A C G T