Information for 14-ACTGACAAGT (Motif 20)

C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A G C T A G C T A C T G A C G T A G T C C G T A A C T G A C G T
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets69.2 +/- 23.8bp
Average Position of motif in Background48.8 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACAAGT----
GGATTGACAGGTCNTT
 A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACTGACAAGT
-TTGACAG--
 C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACAAGT----
NTATTGACAGGTNNTN
 A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACAAGT----
GTATTGACAGGTNNTT
 A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTGACAAGT
RHTGWCAR--
 C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACAAGT----
NNATTGACAGGTGCTT
 A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACTGACAAGT----
NTATTGACAGCTNNTT
 A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACTGACAAGT
VGCTGWCAVB-
 A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

Myb/MA0100.2/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACTGACAAGT
CCAACTGCCA---
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACTGACAAGT
--TGTCANYT
 C G T A A G T C A C G T A C T G C G T A A G T C C T G A C T G A A C T G A C G T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T