Information for 7-CATTAAGTGA (Motif 8)

A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A G T C A C G T G A C T C G T A C G T A C G A T A T C G
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.845
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif63.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets45.4 +/- 25.9bp
Average Position of motif in Background51.4 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX3-2/MA0122.2/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGA-
--TTAAGTGGN
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T
A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGA-
--TTAAGTGGT
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGA
--TTAAGTGC
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CATTAAGTGA--
--TTRAGTGSYK
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CATTAAGTGA
--TTAATTG-
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A
A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGTGA-----
NTNNTTAAGTGGNTNAN
 A C G T A C G T A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CATTAAGTGA-
-NTCAAGTGGN
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CATTAAGTGA--
--TTGAGTGSTT
 A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATTAAGTGA-----
NTNNTTAAGTGGTTANN
 A C G T A C G T A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Hmx1/MA0896.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATTAAGTGA----
ANNCATTAATTGCTNGN
 A C G T A C G T A C G T A T G C C G T A A C G T G A C T C T G A C G T A T C A G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T