Information for 5-GCTGGACACTGACACC (Motif 11)

A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C
Reverse Opposite:
C T A G A T C G A C G T A T C G C G A T A G T C C G T A A T C G C G A T A T C G C A G T A G T C A G T C G T C A T A C G G T A C
p-value:1e-9
log p-value:-2.152e+01
Information Content per bp:1.680
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif43.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets39.1 +/- 22.2bp
Average Position of motif in Background50.8 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf4a/MA0114.3/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTGGACACTGACACC
ATTGGACTTTGACCCC
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTGGACACTGACACC--
--TGGACTTTGNNCTNTG
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTGGACACTGACACC-
--TGGACTTTGNNCTCN
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GCTGGACACTGACACC
------VGCTGWCAVB
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTGGACACTGACACC-----
----ATAAATGACACCTATCA
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCTGGACACTGACACC-
--TGACCTCTGACCCCN
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C A C G T
A C G T A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTGGACACTGACACC
--AGGTCANTGACCTN
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C
A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:GCTGGACACTGACACC-
---------TGACACCT
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCTGGACACTGACACC
----NNNANTGA----
 A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGACACTGACACC
NNATTGGACTTTNGNN--
 A C G T A C G T A C T G A T G C A C G T C T A G C T A G G C T A A T G C G C T A A T G C A C G T A C T G C G T A T A G C G T C A A T G C A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T