Information for 6-TTCACTGGCCTGT (Motif 4)

A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C T G A G T C G T A C C G T A A C T G C G A T A C T G C G T A C G T A
p-value:1e-13
log p-value:-3.099e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.7 +/- 10.3bp
Average Position of motif in Background31.8 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTCACTGGCCTGT
-NNACTTGCCTT-
 A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCACTGGCCTGT
NAGGTCANTGACCT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTCACTGGCCTGT
-TGATTGGCTANN
 A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:forward strand
Alignment:TTCACTGGCCTGT-
--------GCTGTG
 A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTCACTGGCCTGT-
CAATCACTGGCAGAAT
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTCACTGGCCTGT
ACTTTCACTTTC----
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCACTGGCCTGT-
----CTGACCTTTG
 A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTCACTGGCCTGT
ATGCCCGGGCATGT
 A C G T A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.52
Offset:-8
Orientation:reverse strand
Alignment:--------TTCACTGGCCTGT
GTTTTGCTTTCACTTTCC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TTCACTGGCCTGT
---CNAGGCCT--
 A C G T A C G T A G T C C G T A A G T C C G A T C A T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T