Information for 2-AAGGGCGCCCCCT (Motif 2)

C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T
Reverse Opposite:
C T G A C A T G T A C G C A T G T A C G C T A G T G A C T A C G A T G C G A T C T A G C C A G T G C A T
p-value:1e-37
log p-value:-8.549e+01
Information Content per bp:1.636
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.57%
Number of Background Sequences with motif281.9
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets52.7 +/- 19.4bp
Average Position of motif in Background50.8 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGCGCCCCCT-
NNNGGGGCGCCCCCNN
 A C G T A C G T C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCGCCCCCT
ATAAGGGCGCGCGAT
 A C G T A C G T C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAGGGCGCCCCCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGGCGCCCCCT
-AGCGCGCC----
 C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAGGGCGCCCCCT
ATAAAGGCGCGCGAT
 A C G T A C G T C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGGGCGCCCCCT----
GGTCCCGCCCCCTTCTC
 C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGGGCGCCCCCT--------
--TAGCGCCCCCTGGTGGCCA
 C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AAGGGCGCCCCCT----
-----CGCCCCCTGACA
 C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

E2F3/MA0469.2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCGCCCCCT--
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGGCGCCCCCT--------
-ANAGTGCCACCTGGTGGCCA
 C G T A G T C A A C T G C T A G T A C G A T G C A C T G A G T C A T G C G T A C A T G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A