Information for 10-CAACAAAGTT (Motif 13)

G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
Reverse Opposite:
C G T A C G T A A T G C C G A T A C G T A C G T C T A G A C G T C G A T C T A G
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.837
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif78.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets41.1 +/- 21.9bp
Average Position of motif in Background48.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CAACAAAGTT
--ACAAAG--
 G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGTT
GGAACAAAGR-
 A C G T G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CAACAAAGTT
-AACAAT---
 G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGTT
VRRACAAWGG-
 A C G T G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGTT---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGTT---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAACAAAGTT
-AACAAAGG-
 G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAACAAAGTT
-RACAAWGG-
 G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGTT
AAAACAAAGG-
 A C G T G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGTT
RNAACAATGG-
 A C G T G A T C C G T A T G C A G A T C C G T A G T C A C G T A A T C G A C G T G C A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T