Information for 6-GACAGCGAGC (Motif 9)

A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C
Reverse Opposite:
C T A G A G T C A C G T G T A C A C T G A G T C A C G T A C T G A C G T A G T C
p-value:1e-6
log p-value:-1.601e+01
Information Content per bp:1.875
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif42.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.4 +/- 29.7bp
Average Position of motif in Background52.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAGCGAGC---
NNNACCGAGAGTNNN
 A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACAGCGAGC
GAGSCCGAGC
 A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GACAGCGAGC
TTGACAGC----
 A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GACAGCGAGC-
GATATTGACAGCTGCGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCGAGC-
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GACAGCGAGC
CACAGN----
 A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACAGCGAGC
TTGACAGG----
 A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GACAGCGAGC---
ATAAAGGCGCGCGAT
 A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GACAGCGAGC---
ATAAGGGCGCGCGAT
 A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACAGCGAGC---
GNNACCGAGAATNNN
 A C G T A C G T A C T G G T C A A G T C T G C A A C T G A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T