Information for 4-AGGGGGCGCTGTTTGC (Motif 3)

C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
Reverse Opposite:
C A T G A G T C T G C A T G C A C T G A A G T C C G T A A C T G A G T C C T A G A G T C A G T C G A T C A G T C A G T C A C G T
p-value:1e-14
log p-value:-3.294e+01
Information Content per bp:1.754
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.7 +/- 14.1bp
Average Position of motif in Background68.3 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGGGGGCGCTGTTTGC
-------GCTGTG---
 C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGGGGGCGCTGTTTGC
GCCASCAGGGGGCGCYVNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGGCGCTGTTTGC
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGTTTGC
-GGNGCGNCTGTTNNN
 C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGGGGCGCTGTTTGC
-NNAGCAGCTGCT---
 C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.54
Offset:-8
Orientation:forward strand
Alignment:--------AGGGGGCGCTGTTTGC
TGGCCACCAGGGGGCGCTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:AGGGGGCGCTGTTTGC
------NGCTN-----
 C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGGCGCTGTTTGC
NAAGGGGGCGTGGCTTN-
 A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGGGGGCGCTGTTTGC
TGTCAGGGGGCG--------
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGGGGGCGCTGTTTGC
AAGGKGRCGCAGGCA--
 A C G T C G T A A C T G C T A G C T A G C T A G A C T G G A T C A C T G A G T C C G A T A C T G A G C T A C G T A C G T A C T G G T A C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T