Information for 8-CCNTTTGTCCTCT (Motif 12)

A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.385e+01
Information Content per bp:1.936
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 18.4bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCNTTTGTCCTCT-
WCATTTTGKCCTCYT
 A C G T A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCNTTTGTCCTCT
-CCTTTGTTTT--
 A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCNTTTGTCCTCT-
-CNNTTGACCTTTG
 A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CCNTTTGTCCTCT
CATTGACCTTTTGACCTC-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCNTTTGTCCTCT
TGACCTTTTGACCTTT
 A C G T A C G T A C G T A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCNTTTGTCCTCT
TGACCTTTTGACCTC-
 A C G T A C G T A C G T A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCNTTTGTCCTCT
-YCTTTGTTCC--
 A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCNTTTGTCCTCT
-CCATTGTTTT--
 A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCNTTTGTCCTCT
TTGACCTTTTGACCTT-
 A C G T A C G T A C G T A C G T A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCNTTTGTCCTCT
-CCWTTGTY----
 A G T C A G T C T A C G A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T