Information for 7-GCGGTTTCTC (Motif 10)

A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C
Reverse Opposite:
A C T G C T G A A C T G G T C A T C G A C T G A T A G C A T G C T A C G A G T C
p-value:1e-6
log p-value:-1.476e+01
Information Content per bp:1.839
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif160.6
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets50.0 +/- 27.1bp
Average Position of motif in Background53.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTTCTC
TTGCGGTTT---
 A C G T A C G T A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTTTCTC
TTTGCGGTTT---
 A C G T A C G T A C G T A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCGGTTTCTC-
-TGGTTTCAGT
 A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCGGTTTCTC
NNTGTGGTTT---
 A C G T A C G T A C G T A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGGTTTCTC------
-AGTATTCTCGGTTGC
 A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTTCTC
BRRCVGTTDN--
 A C G T A C G T A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCGGTTTCTC------
-NNAATTCTCGNTNAN
 A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTTTCTC
CTGTGGTTTN--
 A C G T A C G T A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCGGTTTCTC-
GTCWGCTGTYYCTCT
 A C G T A C G T A C G T A C G T A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCGGTTTCTC--
GGGGATTCCCCC
 A C T G A T G C T A C G A C T G A G C T A G C T A C G T A G T C A G C T A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C