Information for 8-GTCTGTGCTGCAG (Motif 8)

A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T C T A G A T G C C G T A A C T G A G T C C G T A A G T C C G T A A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.487e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 33.3bp
Average Position of motif in Background27.2 +/- 2.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGTGCTGCAG
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGTGCTGCAG
NNNNTTGTGTGCTTNN-
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTGCTGCAG
VBSYGTCTGG-------
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTGCTGCAG
CTGTCTGG-------
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GTCTGTGCTGCAG
-GCTGTG------
 A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTGCTGCAG
TWGTCTGV-------
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCTGTGCTGCAG
-GCTGTGGTTT--
 A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCTGTGCTGCAG
GTCTGTGGTTT--
 A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCTGTGCTGCAG
NNHTGTGGTTWN-
 A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GTCTGTGCTGCAG-------
GNCTGTASTRNTGBCTCHTT
 A C T G A C G T A G T C A C G T A C T G A C G T A C T G A G T C A C G T A T C G A G T C C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T