Information for 6-CAGCGACCCG (Motif 11)

G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G
Reverse Opposite:
A G T C A C T G A C T G A C T G A C G T A G T C T A C G A G T C A G C T A C T G
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.840
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.56%
Number of Background Sequences with motif198.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets46.9 +/- 26.8bp
Average Position of motif in Background48.2 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGACCCG-----
NNNNTGACCCGGCGCG
 A C G T G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGCGACCCG--
--AAGACCCYYN
 G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGACCCG-----
NNCNTGACCCCGCTCT
 A C G T G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCGACCCG-------
-TCGTACCCGCATCATT
 G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGCGACCCG
---TGACCT-
 G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGACCCG
GGTTAGAGACCT-
 A C G T A C G T A C G T G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAGCGACCCG
AGGTCANTGACCTN
 A C G T A C G T A C G T A C G T G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAGCGACCCG----
----TACCCGCATN
 G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGCGACCCG------
TATCGACCCCCCACAG
 G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGCGACCCG-----
TGTCGTGACCCCTTAAT
 A C G T A C G T G T A C T C G A A C T G A T G C T C A G T G C A A G T C A G T C A G T C T C A G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T