Information for 8-AGGCTGCGCG (Motif 7)

G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
Reverse Opposite:
A T G C A C T G G T A C A C T G G T A C C G T A A C T G G T A C A G T C A C G T
p-value:1e-11
log p-value:-2.696e+01
Information Content per bp:1.864
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif4.31%
Number of Background Sequences with motif453.8
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets50.0 +/- 22.3bp
Average Position of motif in Background46.3 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGCGCG
TWGTCTGV---
 A C G T G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGCTGCGCG
-NGCTN----
 G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGCGCG
GCGCCTGCGCA
 A C G T G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCTGCGCG
GAGSCCGAGC-
 A C G T G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCTGCGCG
--GCTGTG--
 G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTGCGCG---
CAGGCCNNGGCCNN
 A C G T G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTGCGCG--
NNGCNCTGCGCGGC
 A C G T A C G T G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCTGCGCG
--GCTTCC--
 G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGGCTGCGCG
--GCTCCG--
 G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTGCGCG
NNNANTGA---
 A C G T G T C A A C T G A C T G A G T C A C G T C A T G G T A C A C T G G T A C A T C G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T