Information for 7-GCCCTCTAGT (Motif 6)

C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T
Reverse Opposite:
C T G A G T A C G C A T G T C A T C A G C T G A C T A G A T C G C T A G G T A C
p-value:1e-13
log p-value:-3.130e+01
Information Content per bp:1.565
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif12.06%
Number of Background Sequences with motif2224.3
Percentage of Background Sequences with motif5.55%
Average Position of motif in Targets53.5 +/- 28.8bp
Average Position of motif in Background49.9 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTCTAGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCCCTCTAGT-----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTAGT---
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCCTCTAGT-------
GAAAACTAGTTAACATC
 C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTCTAGT
GCNGCCATCTTG-
 A C G T A C G T A C G T C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCCTCTAGT----
----ACTAGTTAAC
 C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTCTAGT
GCCGCCATCTTG-
 A C G T A C G T A C G T C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCCTCTAGT
GCCATCTGTT
 C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCCCTCTAGT------
GAGCCCTTGTCCCTAA
 C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GCCCTCTAGT-
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G G A T C T A G C G A T C G A C T A G T C A C G T C G T A C A T G G A C T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C