Information for 3-HGGGANDTGTAGTYWC (Motif 3)

G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
Reverse Opposite:
C A T G C G T A C T G A C G T A A G T C A G C T G T C A A G T C C T G A G A C T T A G C C G A T G T A C A T G C A T G C C T G A
p-value:1e-23
log p-value:-5.416e+01
Information Content per bp:1.692
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif102.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets52.5 +/- 28.9bp
Average Position of motif in Background32.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:HGGGANDTGTAGTYWC
-GGGAATTGTAGT---
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.84
Offset:-6
Orientation:reverse strand
Alignment:------HGGGANDTGTAGTYWC
GCMTBCTGGGAGTTGTAGTY--
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------HGGGANDTGTAGTYWC
GCATTCTGGGAATTGTAGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:HGGGANDTGTAGTYWC
------CTGTGGTTTN
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:HGGGANDTGTAGTYWC
-----NNTGTGGTTT-
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:HGGGANDTGTAGTYWC
-----GCTGTGGTTT-
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:HGGGANDTGTAGTYWC
----NNHTGTGGTTWN
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:HGGGANDTGTAGTYWC
----GTCTGTGGTTT-
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:HGGGANDTGTAGTYWC
GCGGAGGTGTCGCCTC
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

RUNX3/MA0684.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:HGGGANDTGTAGTYWC
-----TTTGCGGTTT-
 G A C T A T C G A T C G A C T G C G T A A C T G C T G A G A C T A C T G C A G T C T G A A C T G A C G T A G C T G C A T G T A C
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T