Information for 10-CTGGGGSAAGGTC (Motif 8)

A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C
Reverse Opposite:
A C T G C G T A G T A C A G T C A G C T A C G T A T G C G T A C G T A C A G T C A G T C C G T A A C T G
p-value:1e-12
log p-value:-2.910e+01
Information Content per bp:1.836
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.8 +/- 23.6bp
Average Position of motif in Background41.3 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTGGGGSAAGGTC-
--AGGTCAAGGTCA
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGGGGSAAGGTC-
--AGGTCAAGGTCA
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGGGGSAAGGTC-
--TGGGGAAGGGCM
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T
A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGGGGSAAGGTC
GTGGGGGAGGGG-
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTGGGGSAAGGTC--
-----TCAAGGTCAT
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTGGGGSAAGGTC--
-----TCAAGGTCAN
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGGGGSAAGGTC------
--TATTCAAGGTCATGCGA
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CTGGGGSAAGGTC---
------CAAGGHCANV
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGSAAGGTC
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGGGSAAGGTC-
TAGGGCAAAGGTCA
 A G T C C G A T A C T G A C T G A C T G A C T G A T C G C G T A C T G A C T A G A C T G C G A T G T A C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A