Information for 5-GACHTTGRAC (Motif 4)

T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C
Reverse Opposite:
A T C G A C G T A G C T A G T C C G T A C T G A C T G A A C T G C G A T A G T C
p-value:1e-23
log p-value:-5.380e+01
Information Content per bp:1.758
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.07%
Number of Background Sequences with motif629.8
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets47.9 +/- 26.6bp
Average Position of motif in Background51.0 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2/MA0505.1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GACHTTGRAC--
GCTGACCTTGAACTN
 A C G T A C G T A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GACHTTGRAC
ATGACCTTGAA-
 A C G T A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C
C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GACHTTGRAC
TGACCTTGAN-
 A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GACHTTGRAC
TGACCTTGAV-
 A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GACHTTGRAC-
TGACCTTGACCT
 A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------GACHTTGRAC-
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GACHTTGRAC---
TGGACTTTGNNCTCN
 A C G T A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GACHTTGRAC----
TGGACTTTGNNCTNTG
 A C G T A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GACHTTGRAC
NATGACCTTGA--
 A C G T A C G T A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACHTTGRAC-
TGACCTTGACCT
 A C G T T C A G C G T A A G T C G A C T A G C T A C G T A C T G C T G A T G C A T A G C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T