Information for 4-AGATCAMAGR (Motif 6)

C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A
Reverse Opposite:
G A C T G A T C G C A T A C G T A C G T A C T G T C G A G A C T T A G C G C A T
p-value:1e-17
log p-value:-4.137e+01
Information Content per bp:1.514
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif419.8
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets49.2 +/- 27.1bp
Average Position of motif in Background52.4 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:AGATCAMAGR--
ACATCAAAGGNA
 C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--AGATCAMAGR--
AAAGATCAAAGGAA
 A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAMAGR----
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AGATCAMAGR----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---AGATCAMAGR----
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---AGATCAMAGR----
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

Tcf7/MA0769.1/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--AGATCAMAGR
AAAGATCAAAGG
 A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.81
Offset:0
Orientation:forward strand
Alignment:AGATCAMAGR
ACATCAAAGG
 C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.80
Offset:0
Orientation:forward strand
Alignment:AGATCAMAGR
ACWTCAAAGG
 C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--AGATCAMAGR---
AAAGATCAAAGGGTT
 A C G T A C G T C G T A A T C G C T G A A G C T T G A C T G C A T G C A C G T A C T A G C T G A A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T