Information for 11-TCTTGTAACAACA (Motif 10)

A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A
Reverse Opposite:
A G C T A C T G A C G T A C G T A C T G C G A T C G A T C G T A G T A C C G T A C T G A C T A G C G T A
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.819
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.4 +/- 16.3bp
Average Position of motif in Background79.5 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTTGTAACAACA
-AATGTATCAAT-
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTTGTAACAACA---
-CAAACAACAACACCT
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCTTGTAACAACA----
--ATGTCACAACAACAC
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTTGTAACAACA
GCTCGTAAAAA--
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTTGTAACAACA----
TCNNTTTACAGCGNNNT
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTTGTAACAACA----
TCNNTTTACAGCGNNNT
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTTGTAACAACA
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTTGTAACAACA
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTTGTAACAACA----
TCNCTTTACAGCGNNNT
 A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTTGTAACAACA--
ATATCAAAACAAAACA
 A C G T A C G T A G T C A G C T C G A T A C T G A C G T C G T A C G T A G T A C C G T A C G T A G T A C C T G A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A