Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-81 | -1.883e+02 | 0.0000 | 94.0 | 10.65% | 199.9 | 0.61% | motif file (matrix) |
svg |
2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-63 | -1.459e+02 | 0.0000 | 108.0 | 12.23% | 464.8 | 1.42% | motif file (matrix) |
svg |
3 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-46 | -1.063e+02 | 0.0000 | 152.0 | 17.21% | 1429.8 | 4.36% | motif file (matrix) |
svg |
4 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-37 | -8.552e+01 | 0.0000 | 123.0 | 13.93% | 1152.6 | 3.52% | motif file (matrix) |
svg |
5 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-35 | -8.259e+01 | 0.0000 | 208.0 | 23.56% | 3011.5 | 9.19% | motif file (matrix) |
svg |
6 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-31 | -7.277e+01 | 0.0000 | 187.0 | 21.18% | 2721.4 | 8.31% | motif file (matrix) |
svg |
7 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-29 | -6.770e+01 | 0.0000 | 102.0 | 11.55% | 991.5 | 3.03% | motif file (matrix) |
svg |
8 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-28 | -6.490e+01 | 0.0000 | 95.0 | 10.76% | 899.3 | 2.74% | motif file (matrix) |
svg |
9 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-25 | -5.828e+01 | 0.0000 | 139.0 | 15.74% | 1909.2 | 5.83% | motif file (matrix) |
svg |
10 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-24 | -5.677e+01 | 0.0000 | 113.0 | 12.80% | 1370.0 | 4.18% | motif file (matrix) |
svg |
11 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-23 | -5.491e+01 | 0.0000 | 100.0 | 11.33% | 1133.5 | 3.46% | motif file (matrix) |
svg |
12 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-19 | -4.415e+01 | 0.0000 | 58.0 | 6.57% | 498.5 | 1.52% | motif file (matrix) |
svg |
13 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-15 | -3.663e+01 | 0.0000 | 55.0 | 6.23% | 535.8 | 1.64% | motif file (matrix) |
svg |
14 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-14 | -3.353e+01 | 0.0000 | 63.0 | 7.13% | 733.8 | 2.24% | motif file (matrix) |
svg |
15 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-14 | -3.330e+01 | 0.0000 | 64.0 | 7.25% | 757.6 | 2.31% | motif file (matrix) |
svg |
16 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-14 | -3.262e+01 | 0.0000 | 54.0 | 6.12% | 571.5 | 1.74% | motif file (matrix) |
svg |
17 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-13 | -3.101e+01 | 0.0000 | 49.0 | 5.55% | 500.2 | 1.53% | motif file (matrix) |
svg |
18 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-12 | -2.907e+01 | 0.0000 | 87.0 | 9.85% | 1358.8 | 4.15% | motif file (matrix) |
svg |
19 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-12 | -2.857e+01 | 0.0000 | 51.0 | 5.78% | 574.6 | 1.75% | motif file (matrix) |
svg |
20 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-11 | -2.582e+01 | 0.0000 | 46.0 | 5.21% | 519.1 | 1.58% | motif file (matrix) |
svg |
21 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-11 | -2.545e+01 | 0.0000 | 87.0 | 9.85% | 1456.8 | 4.45% | motif file (matrix) |
svg |
22 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-10 | -2.495e+01 | 0.0000 | 52.0 | 5.89% | 656.7 | 2.00% | motif file (matrix) |
svg |
23 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-10 | -2.415e+01 | 0.0000 | 251.0 | 28.43% | 6311.8 | 19.27% | motif file (matrix) |
svg |
24 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-10 | -2.399e+01 | 0.0000 | 22.0 | 2.49% | 133.0 | 0.41% | motif file (matrix) |
svg |
25 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.269e+01 | 0.0000 | 85.0 | 9.63% | 1488.9 | 4.54% | motif file (matrix) |
svg |
26 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.204e+01 | 0.0000 | 156.0 | 17.67% | 3491.0 | 10.66% | motif file (matrix) |
svg |
27 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-8 | -2.040e+01 | 0.0000 | 64.0 | 7.25% | 1032.0 | 3.15% | motif file (matrix) |
svg |
28 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-8 | -1.856e+01 | 0.0000 | 51.0 | 5.78% | 769.1 | 2.35% | motif file (matrix) |
svg |
29 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-7 | -1.773e+01 | 0.0000 | 23.0 | 2.60% | 205.8 | 0.63% | motif file (matrix) |
svg |
30 |
| RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer | 1e-7 | -1.711e+01 | 0.0000 | 86.0 | 9.74% | 1710.6 | 5.22% | motif file (matrix) |
svg |
31 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-7 | -1.669e+01 | 0.0000 | 116.0 | 13.14% | 2579.3 | 7.87% | motif file (matrix) |
svg |
32 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-7 | -1.655e+01 | 0.0000 | 38.0 | 4.30% | 520.3 | 1.59% | motif file (matrix) |
svg |
33 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.544e+01 | 0.0000 | 108.0 | 12.23% | 2408.4 | 7.35% | motif file (matrix) |
svg |
34 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-6 | -1.535e+01 | 0.0000 | 69.0 | 7.81% | 1319.0 | 4.03% | motif file (matrix) |
svg |
35 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.508e+01 | 0.0000 | 78.0 | 8.83% | 1572.3 | 4.80% | motif file (matrix) |
svg |
36 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.479e+01 | 0.0000 | 68.0 | 7.70% | 1312.7 | 4.01% | motif file (matrix) |
svg |
37 |
| Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer | 1e-6 | -1.470e+01 | 0.0000 | 48.0 | 5.44% | 799.5 | 2.44% | motif file (matrix) |
svg |
38 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-6 | -1.390e+01 | 0.0000 | 35.0 | 3.96% | 511.4 | 1.56% | motif file (matrix) |
svg |
39 |
| E-box(bHLH)/Promoter/Homer | 1e-5 | -1.265e+01 | 0.0000 | 20.0 | 2.27% | 217.1 | 0.66% | motif file (matrix) |
svg |
40 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-5 | -1.255e+01 | 0.0000 | 17.0 | 1.93% | 163.1 | 0.50% | motif file (matrix) |
svg |
41 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-5 | -1.228e+01 | 0.0000 | 29.0 | 3.28% | 412.6 | 1.26% | motif file (matrix) |
svg |
42 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-5 | -1.216e+01 | 0.0000 | 34.0 | 3.85% | 530.4 | 1.62% | motif file (matrix) |
svg |
43 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-4 | -1.127e+01 | 0.0001 | 120.0 | 13.59% | 3013.2 | 9.20% | motif file (matrix) |
svg |
44 |
| ETS(ETS)/Promoter/Homer | 1e-4 | -1.080e+01 | 0.0002 | 44.0 | 4.98% | 821.1 | 2.51% | motif file (matrix) |
svg |
45 |
| GFY(?)/Promoter/Homer | 1e-4 | -1.066e+01 | 0.0002 | 16.0 | 1.81% | 170.1 | 0.52% | motif file (matrix) |
svg |
46 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-4 | -1.062e+01 | 0.0002 | 80.0 | 9.06% | 1839.1 | 5.61% | motif file (matrix) |
svg |
47 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-4 | -1.061e+01 | 0.0002 | 14.0 | 1.59% | 134.8 | 0.41% | motif file (matrix) |
svg |
48 |
| RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer | 1e-4 | -1.038e+01 | 0.0002 | 14.0 | 1.59% | 137.8 | 0.42% | motif file (matrix) |
svg |
49 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.014e+01 | 0.0003 | 50.0 | 5.66% | 1007.7 | 3.08% | motif file (matrix) |
svg |
50 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-4 | -9.996e+00 | 0.0003 | 14.0 | 1.59% | 142.5 | 0.44% | motif file (matrix) |
svg |
51 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -9.852e+00 | 0.0004 | 103.0 | 11.66% | 2582.4 | 7.88% | motif file (matrix) |
svg |
52 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-4 | -9.738e+00 | 0.0004 | 107.0 | 12.12% | 2714.0 | 8.28% | motif file (matrix) |
svg |
53 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -9.732e+00 | 0.0004 | 94.0 | 10.65% | 2313.6 | 7.06% | motif file (matrix) |
svg |
54 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-4 | -9.459e+00 | 0.0005 | 27.0 | 3.06% | 434.1 | 1.32% | motif file (matrix) |
svg |
55 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-4 | -9.372e+00 | 0.0006 | 13.0 | 1.47% | 132.6 | 0.40% | motif file (matrix) |
svg |
56 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-3 | -9.058e+00 | 0.0008 | 27.0 | 3.06% | 445.2 | 1.36% | motif file (matrix) |
svg |
57 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-3 | -9.020e+00 | 0.0008 | 20.0 | 2.27% | 282.3 | 0.86% | motif file (matrix) |
svg |
58 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -8.735e+00 | 0.0010 | 29.0 | 3.28% | 504.8 | 1.54% | motif file (matrix) |
svg |
59 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -8.578e+00 | 0.0012 | 49.0 | 5.55% | 1047.8 | 3.20% | motif file (matrix) |
svg |
60 |
| CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.567e+00 | 0.0012 | 5.0 | 0.57% | 19.8 | 0.06% | motif file (matrix) |
svg |
61 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-3 | -8.496e+00 | 0.0012 | 200.0 | 22.65% | 5865.1 | 17.90% | motif file (matrix) |
svg |
62 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.377e+00 | 0.0014 | 7.0 | 0.79% | 45.0 | 0.14% | motif file (matrix) |
svg |
63 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.352e+00 | 0.0014 | 29.0 | 3.28% | 516.3 | 1.58% | motif file (matrix) |
svg |
64 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-3 | -8.205e+00 | 0.0016 | 27.0 | 3.06% | 470.7 | 1.44% | motif file (matrix) |
svg |
65 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -8.203e+00 | 0.0016 | 8.0 | 0.91% | 60.4 | 0.18% | motif file (matrix) |
svg |
66 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.123e+00 | 0.0016 | 77.0 | 8.72% | 1899.0 | 5.80% | motif file (matrix) |
svg |
67 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -8.033e+00 | 0.0018 | 22.0 | 2.49% | 352.2 | 1.08% | motif file (matrix) |
svg |
68 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.020e+00 | 0.0018 | 20.0 | 2.27% | 305.7 | 0.93% | motif file (matrix) |
svg |
69 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.944e+00 | 0.0019 | 38.0 | 4.30% | 769.1 | 2.35% | motif file (matrix) |
svg |
70 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.546e+00 | 0.0027 | 14.0 | 1.59% | 181.7 | 0.55% | motif file (matrix) |
svg |
71 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-3 | -7.527e+00 | 0.0027 | 33.0 | 3.74% | 650.1 | 1.98% | motif file (matrix) |
svg |
72 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.527e+00 | 0.0027 | 33.0 | 3.74% | 650.6 | 1.99% | motif file (matrix) |
svg |
73 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.433e+00 | 0.0029 | 43.0 | 4.87% | 931.1 | 2.84% | motif file (matrix) |
svg |
74 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.370e+00 | 0.0031 | 76.0 | 8.61% | 1918.0 | 5.85% | motif file (matrix) |
svg |
75 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-3 | -7.017e+00 | 0.0044 | 30.0 | 3.40% | 589.1 | 1.80% | motif file (matrix) |
svg |
76 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.845e+00 | 0.0051 | 28.0 | 3.17% | 542.4 | 1.66% | motif file (matrix) |
svg |
77 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.605e+00 | 0.0064 | 39.0 | 4.42% | 857.1 | 2.62% | motif file (matrix) |
svg |
78 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.406e+00 | 0.0077 | 173.0 | 19.59% | 5187.2 | 15.83% | motif file (matrix) |
svg |
79 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.377e+00 | 0.0078 | 32.0 | 3.62% | 670.6 | 2.05% | motif file (matrix) |
svg |
80 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -6.323e+00 | 0.0082 | 45.0 | 5.10% | 1046.7 | 3.19% | motif file (matrix) |
svg |
81 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -6.309e+00 | 0.0082 | 71.0 | 8.04% | 1839.8 | 5.62% | motif file (matrix) |
svg |
82 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-2 | -5.956e+00 | 0.0115 | 45.0 | 5.10% | 1067.3 | 3.26% | motif file (matrix) |
svg |
83 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.836e+00 | 0.0128 | 14.0 | 1.59% | 218.9 | 0.67% | motif file (matrix) |
svg |
84 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -5.774e+00 | 0.0135 | 30.0 | 3.40% | 641.7 | 1.96% | motif file (matrix) |
svg |
85 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-2 | -5.588e+00 | 0.0160 | 73.0 | 8.27% | 1959.1 | 5.98% | motif file (matrix) |
svg |
86 |
| Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer | 1e-2 | -5.493e+00 | 0.0174 | 41.0 | 4.64% | 975.5 | 2.98% | motif file (matrix) |
svg |
87 |
| Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer | 1e-2 | -5.466e+00 | 0.0177 | 15.0 | 1.70% | 252.2 | 0.77% | motif file (matrix) |
svg |
88 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.259e+00 | 0.0215 | 60.0 | 6.80% | 1574.7 | 4.81% | motif file (matrix) |
svg |
89 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.253e+00 | 0.0215 | 99.0 | 11.21% | 2834.7 | 8.65% | motif file (matrix) |
svg |
90 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -4.895e+00 | 0.0303 | 37.0 | 4.19% | 891.5 | 2.72% | motif file (matrix) |
svg |
91 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-2 | -4.779e+00 | 0.0336 | 35.0 | 3.96% | 838.4 | 2.56% | motif file (matrix) |
svg |
92 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -4.748e+00 | 0.0343 | 34.0 | 3.85% | 810.5 | 2.47% | motif file (matrix) |
svg |
93 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.670e+00 | 0.0367 | 4.0 | 0.45% | 30.6 | 0.09% | motif file (matrix) |
svg |