Information for 3-ARAGAGCAAAGGGRAC (Motif 7)

C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
Reverse Opposite:
C T A G C G A T A G C T G A T C A G T C A T G C A C G T A G C T A C G T A T C G T G A C A G C T A T G C G C A T A G C T G A C T
p-value:1e-15
log p-value:-3.578e+01
Information Content per bp:1.598
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif124.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets46.0 +/- 23.6bp
Average Position of motif in Background50.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1/MA0768.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ARAGAGCAAAGGGRAC
AAAGATCAAAGGGTT-
 C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

Tcf7/MA0769.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:ARAGAGCAAAGGGRAC
AAAGATCAAAGG----
 C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-ARAGAGCAAAGGGRAC
NANAGATCAAAGGGNNN
 A C G T C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ARAGAGCAAAGGGRAC
NNNAGATCAAAGGANNN
 A C G T C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ARAGAGCAAAGGGRAC
AAAGATCAAAGGAA--
 C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ARAGAGCAAAGGGRAC
--ACATCAAAGGNA--
 C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ARAGAGCAAAGGGRAC
TATAGATCAAAGGAAAA
 A C G T C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ARAGAGCAAAGGGRAC
TATAGATCAAAGGAAAA
 A C G T C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ARAGAGCAAAGGGRAC
--ACWTCAAAGG----
 C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ARAGAGCAAAGGGRAC
--ACATCAAAGG----
 C T G A C T G A C G T A T A C G C T G A A C T G T A G C G T C A C T G A T C G A T A C G T C A G C T A G T C G A G C T A G A T C
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T