Information for 7-TCASSACCYKGAMCKR (Motif 21)

A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
Reverse Opposite:
A G T C G T A C A C T G A C G T A G C T A G T C G T C A C T G A A C T G A C T G A C G T A T G C A T G C A C G T A C T G C G T A
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.806
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.9 +/- 29.4bp
Average Position of motif in Background41.0 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR----
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCASSACCYKGAMCKR----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
---TGACCTTGACCT-
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
--ATGACCTTGAA---
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
---TGACCTTGACCT-
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
-NATGACCTTGA----
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
-GCTGACCTTGAACTN
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCASSACCYKGAMCKR
NNNNATGACCTTGANTN-
 A C G T A C G T A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
--ATGACCTTGA----
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TCASSACCYKGAMCKR
---TGACCTTGAN---
 A C G T A G T C C G T A T A C G A T C G C G T A A G T C A G T C G A C T A C G T A C T G C T G A G T C A A G T C C A G T C T A G
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T