Information for 5-CGCTGGGCTAAGCCGG (Motif 18)

T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G
Reverse Opposite:
A G T C A G T C A T C G C T A G A G T C A C G T A C G T G T C A A C T G A G T C A G T C G T A C C G T A A C T G A G T C A C T G
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.6 +/- 30.3bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGCTGGGCTAAGCCGG
WDNCTGGGCA-------
 A C G T T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCTGGGCTAAGCCGG----
AACCGGTTNNAACCGGTTTN
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CGCTGGGCTAAGCCGG
------GCTAATCC--
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.49
Offset:7
Orientation:forward strand
Alignment:CGCTGGGCTAAGCCGG
-------TTAATCCG-
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CGCTGGGCTAAGCCGG
NGCTN-----------
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CGCTGGGCTAAGCCGG----
----AGGCTAATCCCCAANG
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CGCTGGGCTAAGCCGG
CCTGCTGAGH--------
 A C G T A C G T T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CGCTGGGCTAAGCCGG----
---NNNATTAATCCGNTTNA
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:CGCTGGGCTAAGCCGG----
---NNNATTAATCCGNTTNA
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:CGCTGGGCTAAGCCGG----
------NNTAATCCNGNCNN
 T A G C A C T G A G T C A C G T A C T G A C T G A C T G G T A C A C G T C G T A C G T A C T A G A G T C A T G C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A