Information for 15-ACGCTCAGAGGGG (Motif 16)

C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A A C T G A G T C A C T G A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.6 +/- 29.2bp
Average Position of motif in Background49.3 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACGCTCAGAGGGG
--DCTCAGCAGG-
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACGCTCAGAGGGG----
--DCHCAGCAGGRGGCC
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACGCTCAGAGGGG--
---CACAGCAGGGGG
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACGCTCAGAGGGG----
--NCGCAGCGGGGGGTC
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACGCTCAGAGGGG----
---CACAGCGGGGGGTC
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACGCTCAGAGGGG-----
-TGCGCATAGGGGAGGAG
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACGCTCAGAGGGG----
--NCNCAGCGGGGGGTC
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGCTCAGAGGGG--
CCACACAGCAGGAGA
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACGCTCAGAGGGG--
CCACACAGCAGGAGA
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:ACGCTCAGAGGGG---
------GGAGGGGGAA
 C G T A A G T C T C A G A G T C A C G T A G T C C G T A A C T G C G T A C T A G A C T G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A