Information for 19-ATGCACGCACAGC (Motif 23)

C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A T C G A G T C C G T A C G A T
p-value:1e-7
log p-value:-1.631e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 21.6bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGCACGCACAGC
TBGCACGCAA---
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:ATGCACGCACAGC
-------CACAGN
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGCACGCACAGC
--CCAGGAACAG-
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATGCACGCACAGC
---CACGCA----
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ATGCACGCACAGC------
----GAGCACAGCAGGACA
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGCACGCACAGC-
---AAATCACAGCA
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATGCACGCACAGC------
----CCACACAGCAGGAGA
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATGCACGCACAGC
---AAATCACTGC
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATGCACGCACAGC------
----CCACACAGCAGGAGA
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ATGCACGCACAGC
---AAACCACAGC
 C G T A A C G T A C T G A T G C C G T A G T A C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C