Information for 3-WRDGTAAACA (Motif 2)

G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A
Reverse Opposite:
C A G T T C A G C A G T C A G T A C G T T C G A G A T C G C T A A G C T C G T A
p-value:1e-24
log p-value:-5.572e+01
Information Content per bp:1.608
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif8.53%
Number of Background Sequences with motif936.3
Percentage of Background Sequences with motif2.01%
Average Position of motif in Targets54.2 +/- 27.2bp
Average Position of motif in Background50.7 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:WRDGTAAACA
AAAGTAAACA
 G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.97
Offset:0
Orientation:forward strand
Alignment:WRDGTAAACA
AAAGTAAACA
 G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-WRDGTAAACA----
CAAAGTAAACANNNN
 A C G T G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:WRDGTAAACA--
TATGTAAACANG
 G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:WRDGTAAACA
WAAGTAAAYA
 G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--WRDGTAAACA
NCTAAGTAAACA
 A C G T A C G T G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--WRDGTAAACA---
NCWRWGTAAACANSV
 A C G T A C G T G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.94
Offset:-5
Orientation:forward strand
Alignment:-----WRDGTAAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:9
Score:0.93
Offset:2
Orientation:forward strand
Alignment:WRDGTAAACA
--DGTAAACA
 G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.93
Offset:1
Orientation:forward strand
Alignment:WRDGTAAACA--
-AAGTAAACAAA
 G C A T T C G A C G A T C T A G A G C T T G C A G T C A G T C A A G T C G T C A A C G T A C G T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A