Information for 6-AGGTTGAGTTGCA (Motif 9)

C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A
Reverse Opposite:
A C G T A C T G G T A C C G T A C T G A A G T C A C G T A G T C C G T A G T C A G T A C A G T C A C G T
p-value:1e-13
log p-value:-3.186e+01
Information Content per bp:1.800
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.9 +/- 24.6bp
Average Position of motif in Background68.1 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGTTGAGTTGCA
AGTTTCAGTTTC-
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA--
---BTGABTGACAGS
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA--
---NTGATTGACAGN
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGTTGAGTTGCA
AGTTTCAKTTTC-
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T

IRF8/MA0652.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA-
AGTTTCGGTTTCGN
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGTTGAGTTGCA
CAGGTAAGTAT--
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA---
----TGAGTGACAGSC
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA
ACTTTCACTTTC-
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA
--CTTGAGTGGCT
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGGTTGAGTTGCA------
----TNAGTTTCGATTTTN
 C G T A C T A G A C T G A C G T C G A T C T A G C G T A A C T G A G C T A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G