Information for 3-TKAACAAATATTDGCT (Motif 5)

G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
Reverse Opposite:
C T G A T C A G A G T C G A C T T C G A G T C A G A C T C G T A C A G T A G C T C A G T A T C G G A C T A G C T G T A C C G T A
p-value:1e-18
log p-value:-4.277e+01
Information Content per bp:1.691
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif12.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets41.9 +/- 24.5bp
Average Position of motif in Background35.2 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TKAACAAATATTDGCT
NNNTAACAATTATAN---
 A C G T A C G T G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TKAACAAATATTDGCT
-AAACAAACATTC---
 G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKAACAAATATTDGCT
NNTNNCAATATTAG--
 G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TKAACAAATATTDGCT
NNTNNCAATATTAG--
 G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TKAACAAATATTDGCT
TTAAGAACAATAAATT---
 A C G T A C G T A C G T G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TKAACAAATATTDGCT
--AACAGCTGTT----
 G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T A C G T A C G T A C G T

Hoxd8/MA0910.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TKAACAAATATTDGCT-
TAAATAATTAATGGCTA
 G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TKAACAAATATTDGCT-
TAAATAATTAATGGCTA
 G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TKAACAAATATTDGCT
NTTNAGAACAATTA------
 A C G T A C G T A C G T A C G T G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TKAACAAATATTDGCT
AAAGTAAACAAAAATT----
 A C G T A C G T A C G T A C G T G A C T C A T G C T G A C T G A T A G C G T C A C T G A G T C A G A C T C G T A A C G T A C G T C T A G C T A G A G T C A G C T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T A C G T