Information for 12-CACAGTYTAGCAG (Motif 15)

A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A G T C A C G T G T C A C T G A C G T A G T A C A G C T A C T G A C G T A T C G
p-value:1e-10
log p-value:-2.488e+01
Information Content per bp:1.834
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.2 +/- 18.8bp
Average Position of motif in Background45.3 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACAGTYTAGCAG--
GACNGTTTAACGGTT
 A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACAGTYTAGCAG
CACAGN-------
 A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CACAGTYTAGCAG--
--CTGTCTGTCACCT
 A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CACAGTYTAGCAG--
---TGTCTGDCACCT
 A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACAGTYTAGCAG
GHTACAWTGTADCHR
 A C G T A C G T A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTYTAGCAG
NWAACCACADNN------
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CACAGTYTAGCAG
AAACCACAGAN------
 A C G T A C G T A C G T A C G T A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CACAGTYTAGCAG
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CACAGTYTAGCAG
-ANCGTTTANN--
 A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CACAGTYTAGCAG-
TCCCAGMCRAGCCCC
 A C G T A T G C C G T A A G T C C T G A A C T G C G A T A G C T C A G T C G T A T A C G A G T C C G T A A T C G A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C