Information for 11-TCCCGGAAAG (Motif 13)

A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G
Reverse Opposite:
A T G C C G A T A G C T A C G T A G T C G T A C A T C G A C T G T C A G T C G A
p-value:1e-11
log p-value:-2.682e+01
Information Content per bp:1.699
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.91%
Number of Background Sequences with motif1154.5
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets42.7 +/- 23.5bp
Average Position of motif in Background50.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1/MA0137.3/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGGAAAG
TTTCCTGGAAA-
 A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TCCCGGAAAG
CTTCCNGGAA--
 A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGGAAAG---
TTTCCTGGAAAGNNN
 A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGGAAAG
TTTCCNGGAAAN
 A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TCCCGGAAAG-
-RCCGGAARYN
 A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G A C G T
A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGGAAAG-
ATTTCCNGGAAATN
 A C G T A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G A C G T
C T G A G A C T A C G T A C G T G T A C G A T C G C T A C T A G C A T G C G T A C G T A C T G A G A C T T A C G

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:7
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TCCCGGAAAG
NNCTTCCNGGAAGN
 A C G T A C G T A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G
A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCCCGGAAAG--
TTTCCAGGAAATGG
 A C G T A C G T A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCCCGGAAAG
-ACCGGAAG-
 A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:TCCCGGAAAG-
-RCCGGAAGTD
 A G C T A G T C A G T C T A G C C A T G A C T G C G T A C T G A C G T A T A C G A C G T
A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G