Information for 6-TTGCCACAAG (Motif 7)

A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C G T A C T G A C T G A G T C C G T A C G T A
p-value:1e-56
log p-value:-1.296e+02
Information Content per bp:1.530
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif10.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets49.2 +/- 26.4bp
Average Position of motif in Background58.2 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGCCACAAG
TTGCAACATN
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTGCCACAAG--
--GTCACATGAY
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCACAAG
CTTGGCAA---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGCCACAAG-
NWAACCACADNN
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTGCCACAAG
NNTTGGCANN--
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCACAAG
TTTCCCAGAAN
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGCCACAAG----------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGCCACAAG
CGTGCCAAG--
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGCCACAAG
HTTTCCCASG--
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGCCACAAG-
AAACCACAGAN
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C C G T A C G T A A C T G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C