Information for 3-NNNNNNHNBNDNN (Motif 6)

G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T
Reverse Opposite:
C G T A G C T A G A C T C G A T T G A C C G A T C A T G C G A T C G T A C A T G C T A G G A C T C G A T
p-value:1e-56
log p-value:-1.308e+02
Information Content per bp:1.318
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif12.69%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets51.6 +/- 26.8bp
Average Position of motif in Background68.8 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.48
Offset:6
Orientation:forward strand
Alignment:NNNNNNHNBNDNN-
------CACTAATT
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

PB0075.1_Sp100_1/Jaspar

Match Rank:2
Score:0.46
Offset:0
Orientation:forward strand
Alignment:NNNNNNHNBNDNN-
ATTTTACGGAAAAT
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T
C T G A C G A T C G A T G C A T G A C T G T C A A T G C A T C G A C T G G C T A C G T A G C T A G C T A C A G T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.43
Offset:3
Orientation:forward strand
Alignment:NNNNNNHNBNDNN-----
---TATCATAATTAAGGA
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.43
Offset:1
Orientation:reverse strand
Alignment:NNNNNNHNBNDNN--
-GGTTCCNNAATTTG
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T
A C G T C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

SPIC/MA0687.1/Jaspar

Match Rank:5
Score:0.42
Offset:1
Orientation:reverse strand
Alignment:NNNNNNHNBNDNN--
-TACTTCCTCTTTTN
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T
A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

PH0019.1_Dbx2/Jaspar

Match Rank:6
Score:0.42
Offset:1
Orientation:reverse strand
Alignment:NNNNNNHNBNDNN----
-NAATTAATTAATTNNN
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0150.1_Pou4f3/Jaspar

Match Rank:7
Score:0.42
Offset:1
Orientation:reverse strand
Alignment:NNNNNNHNBNDNN----
-GACNTCATTAATAANN
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.41
Offset:0
Orientation:reverse strand
Alignment:NNNNNNHNBNDNN
TTACTTCCTNGTN
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T
A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.40
Offset:-2
Orientation:reverse strand
Alignment:--NNNNNNHNBNDNN--
TCNCTTTACAGCGNNNT
 A C G T A C G T G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.40
Offset:1
Orientation:reverse strand
Alignment:NNNNNNHNBNDNN--
-TACTTCCGCTTTTT
 G C T A C T G A G A T C G T A C G C A T G C T A G T A C G C T A A C T G G C T A C T G A C G A T G C A T A C G T A C G T
A C G T G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T