Information for 13-RACTGAGGAWGAA (Motif 28)

C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
Reverse Opposite:
C G A T G C A T A G T C G C A T C G A T A G T C G T A C C G A T A G T C G C T A T C A G G A C T G A T C
p-value:1e-7
log p-value:-1.703e+01
Information Content per bp:1.700
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.68%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif3.49%
Average Position of motif in Targets53.2 +/- 27.6bp
Average Position of motif in Background54.0 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RACTGAGGAWGAA
AAAAAGAGGAAGTA
 A C G T C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RACTGAGGAWGAA-
--NDCAGGAARTNN
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

SPIB/MA0081.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RACTGAGGAWGAA
---AGAGGAA---
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RACTGAGGAWGAA----
WNAGTCADAVTGAAACTN
 A C G T C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RACTGAGGAWGAA--
BAGTCATANTGAAAG
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:RACTGAGGAWGAA
--AACAGGAAGT-
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RACTGAGGAWGAA
---AGAGGAAGTG
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RACTGAGGAWGAA
--ANCAGGAAGT-
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RACTGAGGAWGAA
---ACAGGAAGTG
 C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RACTGAGGAWGAA
AAAAAGCGGAAGTA
 A C G T C T A G C T G A A G T C C G A T T C A G C G T A A C T G C T A G C G T A C G T A C T A G C G T A C G T A
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A