Information for 5-CCCGGGAGGCCCCGCG (Motif 27)

A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
Reverse Opposite:
A G T C A C T G A T G C A C T G A T C G C A T G C A T G A T G C A T G C A C G T A T G C T A G C A T G C A T C G T A C G T A C G
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.776
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets49.7 +/- 28.9bp
Average Position of motif in Background35.0 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGGAGGCCCCGCG
CCCCCTTGGGCCCC---
 A C G T A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCGGGAGGCCCCGCG
-----GAGSCCGAGC-
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CCCGGGAGGCCCCGCG---
-----GACCCCCCGCGAAG
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCGGGAGGCCCCGCG
ATTTCCCAGVAKSCY-----
 A C G T A C G T A C G T A C G T A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCGGGAGGCCCCGCG---
-----CAGGCCNNGGCCNN
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCGGGAGGCCCCGCG-
-NNNGGGGCGCCCCCNN
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCCGGGAGGCCCCGCG
-----AAGACCCYYN-
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
A C G T A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCCGGGAGGCCCCGCG---
-------GGCCCCGCCCCC
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CCCGGGAGGCCCCGCG
TGCCCTGAGGGCA-----
 A C G T A C G T A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CCCGGGAGGCCCCGCG
-GGGGGAATCCCC---
 A T G C A T G C T A G C T A C G A T C G T A C G T G C A A T C G T A C G G T A C G T A C T A G C T G A C A T C G T G A C T C A G
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T