Information for 1-TTGMACTTTG (Motif 2)

A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G
Reverse Opposite:
A G T C C G T A C T G A C G T A A C T G A C G T A C T G A G T C C G T A C T G A
p-value:1e-120
log p-value:-2.783e+02
Information Content per bp:1.941
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif13.81%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets48.7 +/- 24.9bp
Average Position of motif in Background43.8 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TTGMACTTTG-------
-TGGACTTTGNNCTNTG
 A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TTGMACTTTG------
-TGGACTTTGNNCTCN
 A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TTGMACTTTG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTGMACTTTG-----
ATTGGACTTTGACCCC
 A C G T A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTGMACTTTG
CTGACCTTTG
 A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGMACTTTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGMACTTTG---
CCTTGCAATTTTTNN
 A C G T A C G T A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTGMACTTTG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTGMACTTTG------
GTTGACCTTTGACCTTT
 A C G T A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGMACTTTG-----
-TGACCTTTGACCCC
 A G C T A C G T A C T G G T A C G T C A A G T C A C G T A G C T A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C