Information for 16-NNCCAATCNN (Motif 17)

T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
Reverse Opposite:
A T C G C A G T T A C G G C T A C G A T C G A T T A C G T C A G A T G C A C G T
p-value:1e-33
log p-value:-7.765e+01
Information Content per bp:1.350
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.58%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets50.8 +/- 27.3bp
Average Position of motif in Background68.9 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:NNCCAATCNN
AGCCAATCGG
 T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.89
Offset:-5
Orientation:forward strand
Alignment:-----NNCCAATCNN
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---NNCCAATCNN
ACTAGCCAATCA-
 A C G T A C G T A C G T T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:NNCCAATCNN
--CCAATCAA
 T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--NNCCAATCNN------
TGGACCAATCAGCACTCT
 A C G T A C G T T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:NNCCAATCNN--
--CAAATCACTG
 T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C A C G T A C G T
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--NNCCAATCNN-----
CGACCCAATCAACGGTG
 A C G T A C G T T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:NNCCAATCNN
TGCCAA----
 T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--NNCCAATCNN
SCTGTCAVTCAV
 A C G T A C G T T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:NNCCAATCNN-
-CCCAATTAGC
 T G C A T A C G A G T C A T G C G C T A G C T A C G A T A T G C G T C A T A G C A C G T
A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C