Information for 10-YCGCTCAGCC (Motif 12)

G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C
Reverse Opposite:
T A C G A C T G A G T C C A G T A C T G T G C A A C T G A T G C T A C G C T A G
p-value:1e-37
log p-value:-8.748e+01
Information Content per bp:1.758
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif11.69%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif2.97%
Average Position of motif in Targets51.6 +/- 27.9bp
Average Position of motif in Background44.7 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:YCGCTCAGCC----
--GCTCCGCCCMCY
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:YCGCTCAGCC
--GCTCCG--
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YCGCTCAGCC--
--GCTCGGSCTC
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C A C G T A C G T
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:YCGCTCAGCC---
-GGCCCCGCCCCC
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C A C G T A C G T A C G T
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:YCGCTCAGCC----
NAGCCCCGCCCCCN
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C A C G T A C G T A C G T A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:YCGCTCAGCC--
--DCTCAGCAGG
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C A C G T A C G T
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:YCGCTCAGCC
-NGCTN----
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:YCGCTCAGCC----
---GTCAGCANNTN
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:YCGCTCAGCC
---CACAGN-
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YCGCTCAGCC
TGAGTCAGCA
 G A T C A T G C A T C G A G T C A C G T A G T C G T C A A C T G T G A C A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A