Information for 9-TTATTCCTCC (Motif 10)

A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A
p-value:1e-48
log p-value:-1.106e+02
Information Content per bp:1.530
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif7.46%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets51.4 +/- 26.5bp
Average Position of motif in Background47.1 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0123.1_Obox3/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCCTCC---
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0122.1_Obox2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCCTCC---
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTATTCCTCC-
-CNGTCCTCCC
 A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

SPIB/MA0081.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTATTCCTCC
---TTCCTCT
 A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C
A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCCTCC---
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTATTCCTCC---
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTATTCCTCC
TTAATCCT--
 A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C
G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTATTCCTCC
NYTAATCCYB-
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCCTCC
GAATATTCAT--
 A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTATTCCTCC--
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A