Information for 5-AGGRGCWGTGGTCAAG (Motif 9)

C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
Reverse Opposite:
A G T C C G A T A C G T C T A G T C G A G A T C G T A C G T C A A T G C G C T A A T C G G T A C A G T C A G T C G A T C C G A T
p-value:1e-15
log p-value:-3.493e+01
Information Content per bp:1.693
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif54.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets37.6 +/- 27.8bp
Average Position of motif in Background53.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGRGCWGTGGTCAAG
TAGGGCAAAGGTCA--
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGRGCWGTGGTCAAG---
--GGCGAGGGGTCAAGGGC
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGGRGCWGTGGTCAAG
TGGGGCAAAGGTCA--
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGRGCWGTGGTCAAG
AGGGGTCAGAGGTCA--
 A C G T C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGRGCWGTGGTCAAG
GTAGGGCAAAGGTCA--
 A C G T C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGRGCWGTGGTCAAG
GAGGTCAAAGGTCA--
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGGRGCWGTGGTCAAG---
--CTCCAGGGGTCAATTGA
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGRGCWGTGGTCAAG
NNAGGGGCGGGGTNNA-
 A C G T C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGRGCWGTGGTCAAG
-GGGGGTGTGTCC---
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGGRGCWGTGGTCAAG---
--NTNNNGGGGTCANGNNN
 C G T A C T A G A C T G C T A G A C T G T A G C C G A T A T C G C A G T A C T G C T A G A G C T A G T C G T C A C G T A C T A G A C G T A C G T A C G T
A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A