Information for 25-GCTGTGCGTCCAT (Motif 32)

A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G C G T A A G T C A C T G A G T C C G T A A G T C C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.384e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 15.9bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTGTGCGTCCAT
GCTGTG-------
 A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCGTCCAT
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCGTCCAT
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCGTCCAT
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCTGTGCGTCCAT
CCTGCTGAGH------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCTGTGCGTCCAT
NNGCNCTGCGCGGC---
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGCGTCCAT
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCTGTGCGTCCAT
---TTGCGTGCVA
 A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGCGTCCAT
CCCCCTGCTGTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.50
Offset:-8
Orientation:forward strand
Alignment:--------GCTGTGCGTCCAT
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G A G T C A C T G A C G T A G T C A G T C C G T A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T