Information for 15-AAATATTTGC (Motif 23)

C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C
Reverse Opposite:
C T A G A G T C C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.870
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif40.7
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets43.2 +/- 25.1bp
Average Position of motif in Background54.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTGC
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----AAATATTTGC
NNTNNCAATATTAG-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AAATATTTGC---
--ATATTTACATA
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AAATATTTGC---
--ATATTTACATA
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAATATTTGC---
---TRTTTACTTW
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAATATTTGC
AATTATT---
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAATATTTGC----
----ATTTGCATAT
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAATATTTGC
---TGTTTAC
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C
A C G T A C G T A C G T G A C T T C A G C G A T C A G T C A G T C T G A A G T C

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AAATATTTGC----
----ATTTGCATAA
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAATATTTGC----
-TTCATTTGCATAT
 C G T A G T C A C G T A G C A T C G T A A C G T A C G T A C G T T C A G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T