Information for 14-GTTTCACACT (Motif 19)

A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T
Reverse Opposite:
C T G A A T C G A C G T A C T G C G A T A C T G T C G A C G T A C T G A A T G C
p-value:1e-9
log p-value:-2.282e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif101.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets51.6 +/- 29.0bp
Average Position of motif in Background52.8 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GTTTCACACT-
-TTTCACACCT
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACACT-----
NNTTTTCACACCTTNNN
 A C G T A C G T A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX2/MA0688.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTTCACACT--
-TTTCACACCTN
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCACACT--
NTTTTCACACCTT
 A C G T A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTTTCACACT-
-KTTCACACCT
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GTTTCACACT--
--TTCACACCTT
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T A C G T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTTCACACT--
-CTTCACACCTA
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GTTTCACACT-
---TCACACCT
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GTTTCACACT-
---TCACACCT
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTTTCACACT--
--TTMACACCTT
 A T C G A G C T C G A T A G C T A G T C C G T A G T A C C G T A A T G C G A C T A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T