Information for 8-GCAGCATGGG (Motif 10)

A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G
Reverse Opposite:
T A G C G T A C A G T C T G C A G A C T A T C G T A G C G C A T A T C G A T G C
p-value:1e-14
log p-value:-3.238e+01
Information Content per bp:1.723
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif6.70%
Number of Background Sequences with motif912.6
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets48.6 +/- 22.8bp
Average Position of motif in Background49.9 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATGGG-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGCATGGG-
CACAGCAGGGGG
 A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATGGG---
DCHCAGCAGGRGGCC
 A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATGGG
DCTCAGCAGG--
 A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATGGG-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATGGG-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAGCATGGG
-CAGCC----
 A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATGGG---
NCGCAGCGGGGGGTC
 A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCATGGG---
CACAGCGGGGGGTC
 A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G A C G T A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAGCATGGG
TGAGTCAGCA----
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A A T C G A T G C C T G A A C G T C T A G A C T G A T C G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T