Information for 11-CACAAAGGTGBBT (Motif 21)

A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
Reverse Opposite:
C G T A T A C G T A G C G T A C C G T A A G T C A G T C A C G T A C G T C G A T A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.8 +/- 30.7bp
Average Position of motif in Background59.1 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CACAAAGGTGBBT
AACAAAGG-----
 A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CACAAAGGTGBBT
-ACAAAGGNBCCT
 A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACAAAGGTGBBT
RACAAWGG-----
 A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGGTGBBT
AAAACAAAGG-----
 A C G T A C G T A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGGTGBBT
VRRACAAWGG-----
 A C G T A C G T A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACAAAGGTGBBT
-ACAAAG------
 A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CACAAAGGTGBBT--
TCGCGAAGGTTGTACT
 A C G T A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACAAAGGTGBBT
CTCACACAATGGCGC--
 A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGGTGBBT
GGAACAAAGR-----
 A C G T A C G T A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAGGTGBBT
AAACAGACAAAGGAAT--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C G T A C G T A C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G A T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T