p-value: | 1e-9 |
log p-value: | -2.227e+01 |
Information Content per bp: | 1.933 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.70% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 51.4 +/- 28.6bp |
Average Position of motif in Background | 59.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAGGTGGCTTTGT -AGGVNCCTTTGT |
|
|
|
SOX10/MA0442.1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 7 |
Orientation: | forward strand |
Alignment: | TAGGTGGCTTTGT -------CTTTGT |
|
|
|
PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TAGGTGGCTTTGT NTNNTTAAGTGGNTNAN- |
|
|
|
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 4 |
Score: | 0.60 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TAGGTGGCTTTGT--- ------CCWTTGTYYB |
|
|
|
PH0115.1_Nkx2-6/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TAGGTGGCTTTGT AATNTTAAGTGGNTNN-- |
|
|
|
PH0004.1_Nkx3-2/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TAGGTGGCTTTGT NTNNTTAAGTGGTTANN- |
|
|
|
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TAGGTGGCTTTGT--- ------YCTTTGTTCC |
|
|
|
Nkx3-1/MA0124.2/Jaspar
Match Rank: | 8 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TAGGTGGCTTTGT TTAAGTGGT----- |
|
|
|
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TAGGTGGCTTTGT --BNTGDCCTTG- |
|
|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TAGGTGGCTTTGT -AGGTGTCA---- |
|
|
|